DNA Binding Motif
| Accessions: | MA0586.3 (JASPAR 2024) |
| Names: | SPL14 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 7 |
| Consensus: | tCCGTAC |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 125 7 74 377 t 02 23 534 0 26 C 03 0 583 0 0 C 04 0 0 583 0 G 05 0 0 0 583 T 06 583 0 0 0 A 07 0 581 0 2 C |
| Type: | Heterodimer |
| Binding TFs: | Q8RY95 (SBP domain) Q8RY95 |
| Binding Sites: | MA0586.3.1 MA0586.3.10 MA0586.3.11 MA0586.3.12 MA0586.3.13 MA0586.3.14 MA0586.3.15 MA0586.3.16 MA0586.3.17 MA0586.3.18 MA0586.3.19 MA0586.3.2 MA0586.3.20 MA0586.3.3 MA0586.3.4 MA0586.3.5 MA0586.3.6 MA0586.3.7 MA0586.3.8 MA0586.3.9 |
| Publications: | Liang X., Nazarenus T. J., Stone J. M. Identification of a Consensus DNA-Binding Site for the Arabidopsis thaliana SBP Domain Transcription Factor, AtSPL14, and Binding Kinetics by Surface Plasmon Resonance.. Biochemistry 47:3645-3653 (2008). [Pubmed] |
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