DNA Binding Motif
| Accessions: | UP00097A_1 (UniPROBE 20160601) |
| Names: | metal response element binding transcription factor 1, metal response element-binding transcription factor 1, Metal-regulatory transcription factor 1, metalloregulatory transcription factor, MRE-binding transcription factor, Mtf-1, Mtf1, Transcription factor MTF-1 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 16 |
| Consensus: | kggyCGTGYGCAamdh |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.22 0.10 0.42 0.26 k 02 0.15 0.21 0.42 0.21 g 03 0.23 0.16 0.41 0.20 g 04 0.17 0.40 0.09 0.34 y 05 0.03 0.93 0.02 0.02 C 06 0.01 0 0.98 0.01 G 07 0.04 0.02 0.04 0.89 T 08 0.01 0.01 0.97 0.01 G 09 0.01 0.26 0 0.73 Y 10 0.01 0 0.98 0.01 G 11 0.02 0.96 0.01 0.01 C 12 0.98 0 0.01 0.01 A 13 0.50 0.23 0.14 0.13 a 14 0.54 0.29 0.04 0.12 m 15 0.32 0.17 0.26 0.25 d 16 0.27 0.26 0.20 0.27 h |
| Binding TFs: | UP00097A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Binding Sites: | ACCCCGCC AGTGCAAA AGTGTGCA CGAGTGCA CGCGTGCA CGGGTGCA CGTGCGCA CGTGTGAA CTGCACAC GAGTGCAA GGGTGCAA GGTGCAAA GTGCAAAA GTGCACAC GTGCGCAA GTGCGCAC GTGTGCAA TGCGCACA TGTGCACA CGGGCGCA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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