DNA Binding Site
| Accessions: | GTGCGCAC (UniPROBE 20160601) |
| Organisms: | Mus musculus, Plasmodium falciparum, Zymoseptoria tritici, Tuber melanosporum, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | GTGCGCAC |
| Type: | Heterodimer |
| Binding TFs: | UP00097A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00443C (AP2 domain) UP00529A (Fork head domain) UP00533A (Fork head domain) UP00611C (Homeobox domain, 'Paired box' domain) |
| Binding Motifs: | UP00097A_1 kggyCGTGYGCAamdh UP00097A_2 aaatawgAAawawv UP00443C_1 waktrtrGTGCACTAaaaathd UP00529A_1 dhkwmkaACGCACAmwadmcgc UP00529A_2 tybsmssgtGssCacyrrgsaw UP00533A_1 akmcwgyGCGCACAAArvawrmw UP00533A_2 ayckbvrgtGTGyGkCrsycgwm UP00611C_1 rcrkmmgtgTGCAcacatcmAtw |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.