DNA Binding Site

						

			
Accessions: AGTGTGCA (UniPROBE 20160601)

			
Organisms: Mus musculus, Plasmodium falciparum, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: AGTGTGCA
Type: Heterodimer
Binding TFs: UP00026A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00042A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00097A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00429A (AP2 domain)
UP00611C (Homeobox domain, 'Paired box' domain)
Binding Motifs: UP00026A_1 kmmaTGTGCACAyAwam
UP00042A_1 mwdaTGTGCACAymmky
UP00097A_1 kggyCGTGYGCAamdh
UP00026A_2 mvwrGCACAyAAawwr
UP00042A_2 rrmrGCACACACkcmm
UP00097A_2 aaatawgAAawawv
UP00429A_1 thdwrwryACACACayyyrrrw
UP00611C_1 rcrkmmgtgTGCAcacatcmAtw
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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