Transcription Factor

Accessions: 1t2k_A (3D-footprint 20231221), 2o6g_E (3D-footprint 20231221), 2o6g_G (3D-footprint 20231221)
Names: Interferon regulatory factor 3, IRF-3, IRF3_HUMAN
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: Q14653
Length: 110
Pfam Domains: 5-109 Interferon regulatory factor transcription factor
Sequence:
(in bold interface residues)
1 TPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFGIFQAWAEATG 60
61 AYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHDPHKIYEFVNS
Interface Residues: 38, 40, 72, 76, 77, 79, 80, 83, 84
3D-footprint Homologues: 2o61_A, 2pi0_B, 1if1_B, 2irf_L, 7oot_B
Binding Motifs: 1t2k_ABCD TTTAAnTTTnnnnATGTCAA
2o6g_E TTTcCnnaT
2o6g_EFGH GGArAnTGAAAGGGAAAnTnAA
Binding Sites: 2o6g_C
2o6g_D
Publications: Panne D, Maniatis T, Harrison S.C. Crystal structure of ATF-2/c-Jun and IRF-3 bound to the interferon-beta enhancer. The EMBO journal 23:4384-93 (2004). [Pubmed]

Panne D, Maniatis T, Harrison S.C. An atomic model of the interferon-beta enhanceosome. Cell 129:1111-23 (2007). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.