Transcription Factor

Accessions: AtMYB79 (AthaMYB 1.0)
Names: AtMYB79, Myb domain protein 79, Myb-like protein, Putative myb protein
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9T0G9
Length: 262
Pfam Domains: 8-55 Myb-like DNA-binding domain
11-70 Myb-like DNA-binding domain
61-105 Myb-like DNA-binding domain
65-118 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MVEEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLK 60
61 RGQITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTNNAEKI 120
121 KSRLLKRQHFKEQREIELQQEQQLFQFDQLGMKKIISLLEENNSSSSSDGGGDVFYYPDQ 180
181 ITHSSKPFGYNSNSLEEQLQGRFSPVNIPDANTMNEDNAIWDGFWNMDVVNGHGGNLGVV 240
241 AATAACGPRKPYFHNLVIPFC*
Interface Residues: 8, 43, 45, 46, 48, 49, 53, 54, 95, 96, 99, 100, 103, 104, 105
3D-footprint Homologues: 3osg_A, 1vfc_A, 1w0t_A, 2kdz_A, 1mse_C, 3zqc_A, 6kks_A, 7xur_A
Binding Motifs: AtMYB79_I awmAGTTr
AtMYB79_II rbTrGTTr
Binding Sites: AAAAGTTA
ACAAGTTA
AGGTTA
AGTAGTTA
AGTGGTTA
ATTAGTTG
GCTTGTTG
GTCAGTTA
GTTAGTTG
TACTGTTG
TAGTTA
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.