Transcription Factor

						

			
Accessions: AtMYB79 (AthaMYB 1.0)

			
Names: AtMYB79, Myb domain protein 79, Myb-like protein, Putative myb protein
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9T0G9
Length: 262
Pfam Domains:      8-55 Myb-like DNA-binding domain
    11-70 Myb-like DNA-binding domain
   61-105 Myb-like DNA-binding domain
   65-118 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MVEEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLK   60
  61 RGQITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTNNAEKI  120
 121 KSRLLKRQHFKEQREIELQQEQQLFQFDQLGMKKIISLLEENNSSSSSDGGGDVFYYPDQ  180
 181 ITHSSKPFGYNSNSLEEQLQGRFSPVNIPDANTMNEDNAIWDGFWNMDVVNGHGGNLGVV  240
 241 AATAACGPRKPYFHNLVIPFC*
Interface Residues: 8, 43, 45, 46, 48, 49, 53, 54, 95, 96, 99, 100, 103, 104, 105
3D-footprint Homologues: 3osg_A, 1vfc_A, 1w0t_A, 2kdz_A, 6kks_A, 1mse_C, 3zqc_A, 7xur_A
Binding Motifs: AtMYB79_I awmAGTTr
AtMYB79_II rbTrGTTr
Binding Sites: AAAAGTTA
ACAAGTTA
AGGTTA
AGTAGTTA
AGTGGTTA
ATTAGTTG
GCTTGTTG
GTCAGTTA
GTTAGTTG
TACTGTTG
TAGTTA
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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