footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

DNA Binding Site

Accessions:	GCTTGTTG (AthaMYB 1.0)
Organisms:	Arabidopsis thaliana
Libraries:	AthaMYB 1.0 ¹ ¹ Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Length:	8
Sequence:	GCTTGTTG
Type:	Heterodimer
Binding TFs:	AtMYB10 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB102 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB103 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB106 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB107 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB11 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB112 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB113 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB114 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB121 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB122 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB123 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB124 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB13 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB14 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB15 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB20 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB22 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB23 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB26 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB27 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB3 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB31 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB32 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB33 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB35 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB36 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB37 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB39 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB40 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB41 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB42 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB43 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB45 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB47 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB48 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB49 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB5 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB50 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB52 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB54 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB55 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB56 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB59 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB6 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB63 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB67 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB69 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB7 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB71 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB72 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB74 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB75 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB78 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB79 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB8 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB80 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB81 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB82 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB83 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB85 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB86 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB88 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB89 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB9 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB90 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB91 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB94 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB95 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB96 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB99 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Binding Motifs:	AtMYB102_II / AtMYB90_II rsTkGTTr AtMYB103_II RkTwGKTr AtMYB106_II / AtMYB32_II / AtMYB33_II / AtMYB37_II / AtMYB3_II / AtMYB75_II / AtMYB7_II GCTTGTTG AtMYB107_II rbTdGTTr AtMYB10_II RGTdGKTr AtMYB112_II rbTaGTTr AtMYB113_II RbTdGTTR AtMYB114_II / AtMYB11_II rsTdGTTr AtMYB121_II RkTwGKTr AtMYB122_II GCwkGTTr AtMYB123_II GCTwGTTr AtMYB124_II / AtMYB56_II RbTWGTTr AtMYB13_II GgTwGkTG AtMYB14_II / AtMYB71_II rkTaGTTr AtMYB15_II GbTwGkTG AtMYB20_II RbWdGTTr AtMYB22_II GyTwGTTr AtMYB23_II GYWdGTTr AtMYB26_II GyTwGTTr AtMYB27_II / AtMYB48_II rkTrGTTr AtMYB31_II GvywGkTG AtMYB35_II / AtMYB54_II rsTwGTTr AtMYB36_II / AtMYB55_II / AtMYB69_II GywdGTTr AtMYB39_II GsTwGkTr AtMYB40_II / AtMYB43_II / AtMYB47_II / AtMYB79_II / AtMYB91_II rbTrGTTr AtMYB41_II rbTrGTTA AtMYB42_II rGTdGKTr AtMYB45_II GkTAGTTr AtMYB49_II RkTrGTTr AtMYB50_II / AtMYB86_II GkTwGkTr AtMYB52_II RSWdGTTR AtMYB59_II / AtMYB88_II rbTdGTTr AtMYB5_II RbWdGTTR AtMYB63_II GbTwGkTR AtMYB67_II / AtMYB82_II rkTrGTTR AtMYB6_II rbTdGTTr AtMYB72_II rgTaGTTr AtMYB74_II rswkGTTr AtMYB78_II / AtMYB81_II / AtMYB83_II GywdGTTr AtMYB80_II GkTwGkTr AtMYB85_II rbTwGTTr AtMYB89_II GbTkGTTr AtMYB8_II rbTrGTTr AtMYB94_II / AtMYB96_II GtTAGTTG AtMYB95_II RkTdGTTr AtMYB99_II rgTwGkTr AtMYB9_II rsTwGkTr
Publications:	Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]

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