footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

DNA Binding Site

Accessions:	GTTAGTTG (AthaMYB 1.0)
Organisms:	Arabidopsis thaliana
Libraries:	AthaMYB 1.0 ¹ ¹ Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Length:	8
Sequence:	GTTAGTTG
Type:	Heterodimer
Binding TFs:	AtMYB0 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB10 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB101 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB103 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB108 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB112 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB121 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB124 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB13 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB14 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB15 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB19 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB20 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB23 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB27 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB30 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB40 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB42 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB43 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB44 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB45 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB47 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB48 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB49 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB50 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB53 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB56 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB58 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB59 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB6 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB60 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB61 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB62 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB65 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB66 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB67 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB71 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB72 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB73 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB78 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB79 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB8 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB80 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB81 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB82 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB83 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB85 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB86 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB88 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB89 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB91 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB94 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB95 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB96 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB97 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) AtMYB99 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Binding Motifs:	AtMYB0_II rkTAGTTr AtMYB101_II / AtMYB65_II / AtMYB97_II GTTAGTTr AtMYB103_II RkTwGKTr AtMYB108_II / AtMYB62_II GTwrGTTr AtMYB10_II RGTdGKTr AtMYB112_II rbTaGTTr AtMYB121_II RkTwGKTr AtMYB124_II / AtMYB56_II RbTWGTTr AtMYB13_II GgTwGkTG AtMYB14_II / AtMYB71_II rkTaGTTr AtMYB15_II GbTwGkTG AtMYB19_II GkTaGkTr AtMYB20_II RbWdGTTr AtMYB23_II GYWdGTTr AtMYB27_II / AtMYB48_II rkTrGTTr AtMYB30_II / AtMYB60_II GdYAGKTR AtMYB40_II / AtMYB43_II / AtMYB47_II / AtMYB79_II / AtMYB91_II rbTrGTTr AtMYB42_II rGTdGKTr AtMYB44_II GdtAGTTr AtMYB45_II GkTAGTTr AtMYB49_II RkTrGTTr AtMYB50_II / AtMYB86_II GkTwGkTr AtMYB53_II / AtMYB61_II GkTWGkTR AtMYB58_II GkTwGkTG AtMYB59_II / AtMYB88_II rbTdGTTr AtMYB66_II rkTrGTTA AtMYB67_II / AtMYB82_II rkTrGTTR AtMYB6_II rbTdGTTr AtMYB72_II rgTaGTTr AtMYB73_II RdYAGTTr AtMYB78_II / AtMYB81_II / AtMYB83_II GywdGTTr AtMYB80_II GkTwGkTr AtMYB85_II rbTwGTTr AtMYB89_II GbTkGTTr AtMYB8_II rbTrGTTr AtMYB94_II / AtMYB96_II GtTAGTTG AtMYB95_II RkTdGTTr AtMYB99_II rgTwGkTr
Publications:	Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]

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