DNA Binding Motif

						

			
Accessions: AtMYB40_II (AthaMYB 1.0), AtMYB43_II (AthaMYB 1.0), AtMYB47_II (AthaMYB 1.0), AtMYB79_II (AthaMYB 1.0), AtMYB91_II (AthaMYB 1.0)

			
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Length: 8
Consensus: rbTrGTTr
Weblogo: 
PSSM: P0      A      C      G      T
01      3      0      3      0      r
02      0   1.71   2.57   1.71      b
03      1      0      0      5      T
04      3      0      2      1      r
05      0      0      6      0      G
06      0      0      0      6      T
07      0      0      0      6      T
08      4      0      2      0      r
Type: Heterodimer
Binding TFs: AtMYB40 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB43 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB47 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB79 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB91 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Binding Sites: AGGTTA
AGTAGTTA
AGTGGTTA
GCTTGTTG
GTTAGTTG
TAGTTA
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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