DNA Binding Site
| Accessions: | CATGCATA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CATGCATA |
| Type: | Heterodimer |
| Binding TFs: | UP00351A (KilA-N domain) UP00211A (Homeobox domain, Pou domain - N-terminal to homeobox domain) UP00616D (Homeobox domain, Pou domain - N-terminal to homeobox domain) UP00617C (Homeobox domain, Pou domain - N-terminal to homeobox domain) |
| Binding Motifs: | UP00211A_1 wardTATGCATAwtdwa UP00351A_1 rrkkavCaTGCATmamgrwrg UP00616D_1 tkwryyhATTATGCrkryakhm UP00617C_1 ytddwwtTATGCATAwwadarw |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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