DNA Binding Site
| Accessions: | MA1458.2.16 (JASPAR 2024), MA1579.2.10 (JASPAR 2024), MA1579.2.15 (JASPAR 2024), MA1579.2.18 (JASPAR 2024), MA1579.2.5 (JASPAR 2024), MA1579.2.9 (JASPAR 2024), MA1667.3.17 (JASPAR 2024), MA2169.1.2 (JASPAR 2024) |
| Organisms: | Drosophila melanogaster, Homo sapiens, Arabidopsis thaliana, Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | CTCCAGAA |
| Type: | Heterodimer |
| Binding TFs: | P22813 (HSF-type DNA-binding) Q9LV52 (HSF-type DNA-binding, Interferon-induced 35 kDa protein (IFP 35) N-terminus) Q9HCK0 (Zinc finger, C2H2 type, BTB/POZ domain, Zinc-finger double domain, C2H2-type zinc finger) G5EFT5 P22813 Q9HCK0 Q9LV52 |
| Binding Motifs: | MA1458.2 TTCcAGAA MA1579.2 cTCCAGAA MA1667.3 TTCyAGAA MA2169.1 TTCyAGAA |
| Publications: | Nitta KR, Jolma A, Yin Y, Morgunova E, Kivioja T, Akhtar J, Hens K, Toivonen J, Deplancke B, Furlong EE, Taipale J. Conservation of transcription factor binding specificities across 600 million years of bilateria evolution. Elife : (2015). [Pubmed] Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] Wu C. Heat shock transcription factors: structure and regulation. Annu Rev Cell Dev Biol : (1995;11:441-69.). [Pubmed] Narasimhan K, Lambert SA, Yang AW, Riddell J, Mnaimneh S, Zheng H, Albu M, Najafabadi HS, Reece-Hoyes JS, Fuxman Bass JI, Walhout AJ, Weirauch MT, Hughes TR. Mapping and analysis of Caenorhabditis elegans transcription factor sequence specificities. Elife : (2015). [Pubmed] |
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