DNA Binding Site
| Accessions: | ATAACAAT (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Strongylocentrotus purpuratus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ATAACAAT |
| Type: | Heterodimer |
| Binding TFs: | UP00014A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00307A (Homeobox domain, Homeobox KN domain) UP00531A (Fork head domain) |
| Binding Motifs: | UP00014A_1 mwaAACAATTrAwhw UP00307A_1 htdtwrAACAATAGwmytmc UP00014A_2 gwycacATTCAtryrat UP00531A_1 kmtcaamAATAACAAmwcrrcm UP00531A_2 wvmgmwsRTAAACAAtbyygtc |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.