DNA Binding Site

Accessions: 2or1_A (3D-footprint 20231221), 3cro_A (3D-footprint 20231221)
Organisms: Phage 434
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 19
Sequence: AGTACAAACTTTCTTGTAT
Type: Heterodimer
Binding TFs: 2or1_L / 2or1_R (Helix-turn-helix, Helix-turn-helix domain, Helix-turn-helix domain)
3cro_R (Helix-turn-helix, Helix-turn-helix domain, Helix-turn-helix domain)
Binding Motifs: 2or1_L TACAAnAnA
2or1_LR TACAAnnTnTnTTGTA
3cro_LR TAMwAnnnnnnkTGTA
3cro_R tAcA
Publications: Aggarwal A.K, Rodgers D.W, Drottar M, Ptashne M, Harrison S.C. Recognition of a DNA operator by the repressor of phage 434: a view at high resolution. Science (New York, N.Y.) 242:899-907 (1988). [Pubmed]

Mondragón A, Harrison S.C. The phage 434 Cro/OR1 complex at 2.5 A resolution. Journal of molecular biology 219:321-34 (1991). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.