DNA Binding Motif

						

			
Accessions: 3cro_LR (3D-footprint 20231221)

			
Names: PROTEIN (434 CRO)
Organisms: Phage 434
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
Length: 16
Consensus: TAMwAnnnnnnkTGTA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02     96      0      0      0      A
03     66     30      0      0      M
04     42     12     18     24      w
05     96      0      0      0      A
06     24     24     24     24      n
07     24     24     24     24      n
08     24     24     24     24      n
09     24     24     24     24      n
10     24     24     24     24      n
11     24     24     24     24      n
12     18     18     24     36      k
13      0      0      0     96      T
14      6      0     90      0      G
15      0      0      0     96      T
16     96      0      0      0      A
Type: Heterodimer
Binding TFs: 3cro_L (Helix-turn-helix, Helix-turn-helix domain, Helix-turn-helix domain)
3cro_R (Helix-turn-helix, Helix-turn-helix domain, Helix-turn-helix domain)
Binding Sites: 3cro_A
3cro_B
			
Publications: Mondragón A, Harrison S.C. The phage 434 Cro/OR1 complex at 2.5 A resolution. Journal of molecular biology 219:321-34 (1991). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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