DNA Binding Site
| Accessions: | 1run_E (3D-footprint 20231221), 1ruo_E (3D-footprint 20231221) |
| Organisms: | Escherichia coli, strain K12 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Length: | 13 |
| Sequence: | CGAAAAATGTGAT |
| Type: | Heterodimer |
| Binding TFs: | 1run_B (Cyclic nucleotide-binding domain, Bacterial regulatory proteins, crp family, Crp-like helix-turn-helix domain) 1ruo_B (Cyclic nucleotide-binding domain, Bacterial regulatory proteins, crp family, Crp-like helix-turn-helix domain) |
| Binding Motifs: | 1run_B ATcaCA 1ruo_B TgtGA |
| Publications: | Parkinson G, Gunasekera A, Vojtechovsky J, Zhang X, Kunkel T.A, Berman H, Ebright R.H. Aromatic hydrogen bond in sequence-specific protein DNA recognition. Nature structural biology 3:837-41 (1996). [Pubmed] |
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