DNA Binding Site
| Accessions: | 2xro_Y (3D-footprint 20231221) |
| Organisms: | Pseudomonas putida, strain DOT-T1E |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Length: | 42 |
| Sequence: | GCTGAATCGTAATGCGGTAGAGTGTAGCATTATGTGATACTC |
| Type: | Heterodimer |
| Binding TFs: | 2xro_E (Bacterial transcriptional regulator, Transcriptional regulator, IclR helix-turn-helix domain, Winged helix-turn-helix DNA-binding) 2xro_F (Bacterial transcriptional regulator, Transcriptional regulator, IclR helix-turn-helix domain, Winged helix-turn-helix DNA-binding) |
| Binding Motifs: | 2xro_ABEF TnTCAnnnnnTGCTAnnnnnTACCGnnnnnCGAnT 2xro_E CGgtA |
| Publications: | Lu D, Fillet S, Meng C, Alguel Y, Kloppsteck P, Bergeron J, Krell T, Gallegos M.T, Ramos J, Zhang X. Crystal structure of TtgV in complex with its DNA operator reveals a general model for cooperative DNA binding of tetrameric gene regulators. Genes & development 24:2556-65 (2010). [Pubmed] |
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