DNA Binding Motif

						

			
Accessions: TEAD4_HOXB13_2 (HumanTF2 1.0)

			
Names: TEAD4_HOXB13
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: symATAAAATGCr
Weblogo: 
PSSM: P0      A      C      G      T
01    134    379    415     70      s
02      0    197      0    182      y
03    379    180     42    103      m
04    379      4    116     12      A
05      0      0      1    379      T
06    379      0     61     44      A
07    379      7      7     16      A
08    379     16      0      0      A
09    379      0     10      0      A
10      8     59      5    379      T
11      2      0    379      0      G
12     29    318     27     62      C
13    123     42    174     40      r
Type: Heterodimer
Binding TFs: HOXB13_TF1 / HOXB13_TF2 (Homeobox domain)
TEAD4_TF1 (TEA/ATTS domain family)
HOXB13_Full (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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