DNA Binding Motif
| Accessions: | UP00428A_1 (UniPROBE 20160601) |
| Names: | AAS3, Amino acid biosynthesis regulatory protein, ARG9, GCN4, General control protein GCN4, YEL009C |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 14 |
| Consensus: | wrdrTGAsTCAywa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.47 0.08 0.17 0.28 w 02 0.25 0.24 0.32 0.19 r 03 0.28 0.12 0.28 0.32 d 04 0.46 0.05 0.48 0.02 r 05 0.01 0.01 0.01 0.98 T 06 0 0.01 0.95 0.05 G 07 0.96 0.02 0 0.02 A 08 0 0.50 0.49 0 s 09 0 0 0 0.99 T 10 0.02 0.98 0 0 C 11 0.99 0 0.01 0.01 A 12 0.01 0.42 0.07 0.50 y 13 0.36 0.21 0.14 0.28 w 14 0.38 0.22 0.24 0.16 a |
| Binding TFs: | UP00428A (bZIP transcription factor, Basic region leucine zipper) |
| Binding Sites: | GTGACTCA TGACGTCA GTGACTAA AGAGTCAC ATGACGCA ATGACTAA ATGACTCA ATGACTCG ATGAGTCA ATTAGTCA CATGACTC CTGACTCA CTGAGTCA GAGTCACA GAGTCACC GAGTCATA GAGTCATC GTGAGTCA TGACTCAA TGAGTCAA |
| Publications: | Alibés A, Nadra AD, De Masi F, Bulyk ML, Serrano L, Stricher F. Using protein design algorithms to understand the molecular basis of disease caused by protein-DNA interactions: the Pax6 example. Nucleic Acids Res. (2010) Aug 4. [Pubmed] |
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