DNA Binding Motif

						

			
Accessions: ELK1_FOXI1_1 (HumanTF2 1.0), UN0496.1 (JASPAR 2024)

			
Names: ELK1_FOXI1, ELK1::FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1, JASPAR 2024 2
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX, HT-SELEX
Length: 17
Consensus: AsCGGAArTrTmAACAk
Weblogo: 
PSSM: P0      A      C      G      T
01   4184    160    945    802      A
02    278   3473   1656    237      s
03    681   5129     14      9      C
04     16     98   5129      1      G
05      0     28   5129     10      G
06   5129     13      0     32      A
07   5129      0      0    193      A
08   1351    457   3305     16      r
09    146   1105     24   3854      T
10   2269     40   2860     58      r
11    545    428    260   5129      T
12   3108   2021      0     12      m
13   5129    788     20    456      A
14   5129     66    479    127      A
15     10   3868      0   1260      C
16   5129    104     84    493      A
17    718   1187   1486   1737      k
Type: Heterodimer
Binding TFs: Q12951 (Fork head domain)
ELK1_TF2 (Ets-domain)
ELK1_Full (Ets-domain)
FOXI1_TF2 (Fork head domain)
ELK1_TF1 (Ets-domain)
Q12951
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.