DNA Binding Motif

						

			
Accessions: ERF_DLX3_2 (HumanTF2 1.0)

			
Names: ERF_DLX3
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 17
Consensus: rccGGAwrkvsyaaTta
Weblogo: 
PSSM: P0      A      C      G      T
01    115     53     72     43      r
02     34    140     47     21      c
03     53    188     29     15      c
04      2      0    188      0      G
05      3      8    188     21      G
06    188      8      1     13      A
07    188     21      3     99      w
08     62     32     78     15      r
09     21     42     51     73      k
10     59     51     64     14      v
11     26     59     80     22      s
12     31    112     31     75      y
13    188     70     84     10      a
14    188     51     39     67      a
15      0     15     12    188      T
16     32     47     32    188      t
17    188     28     70     77      a
Type: Heterodimer
Binding TFs: DLX3_TF2 (Homeobox domain)
DLX3_Crystal (Homeobox domain)
DLX3_Full (Homeobox domain, Homeobox protein distal-less-like N terminal )
ERF_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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