DNA Binding Motif

						

			
Accessions: FOXJ2_HOXB13_1 (HumanTF2 1.0)

			
Names: FOXJ2_HOXB13
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 15
Consensus: tTTwAykdgwmAACA
Weblogo: 
PSSM: P0      A      C      G      T
01     26     37     53    165      t
02     12     10     18    281      T
03     33      0      0    281      T
04    118     24      5    281      w
05    281      0     37     36      A
06     56    126      0    281      y
07     47     42    104     88      k
08    148      0    133     98      d
09     36     25    186     34      g
10    163     71    114    281      w
11    173    108     11     21      m
12    281     12     27     54      A
13    281      0     40      0      A
14     10    281      1     93      C
15    281      1     46     75      A
Type: Heterodimer
Binding TFs: HOXB13_TF1 / HOXB13_TF2 (Homeobox domain)
FOXJ2_TF1 (Fork head domain)
HOXB13_Full (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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