Transcription Factor
Accessions: | 5w43_B (3D-footprint 20231221) |
Names: | Capsular synthesis regulator component B, RCSB_ECOLI, Transcriptional regulatory protein RcsB |
Organisms: | Escherichia coli, strain K12 |
Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
Length: | 194 |
Pfam Domains: | 5-119 Response regulator receiver domain 130-180 Sigma-70, region 4 136-191 Bacterial regulatory proteins, luxR family |
Sequence: (in bold interface residues) | 1 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 60 61 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 120 121 ALQKPESVSRLLEKIKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKL 180 181 GVENDIALLNYLSS |
Interface Residues: | 90, 91, 92, 94, 95, 116, 165, 166, 167, 168, 170, 171, 172, 174 |
3D-footprint Homologues: | 3zpl_B, 7ve5_B, 5w43_B, 6ide_A, 4wuh_B, 1zlk_A |
Binding Motifs: | 5w43_AB taGGAannmTCTtA 5w43_B taAGA |
Binding Sites: | 5w43_E 5w43_F |
Publications: | Filippova EV, Zemaitaitis B, Aung T, Wolfe AJ, Anderson WF. Structural Basis for DNA Recognition by the Two-Component Response Regulator RcsB. MBio : (2018). [Pubmed] |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.