Transcription Factor

						

			
Accessions: 5w43_B (3D-footprint 20231221)

			
Names: Capsular synthesis regulator component B, RCSB_ECOLI, Transcriptional regulatory protein RcsB
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 194
Pfam Domains:     5-119 Response regulator receiver domain
  130-180 Sigma-70, region 4
  136-191 Bacterial regulatory proteins, luxR family
Sequence: 
(in bold interface residues)		   1 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG   60
  61 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA  120
 121 ALQKPESVSRLLEKIKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKL  180
 181 GVENDIALLNYLSS
Interface Residues: 90, 91, 92, 94, 95, 116, 165, 166, 167, 168, 170, 171, 172, 174
3D-footprint Homologues: 3zpl_B, 7ve5_B, 5w43_B, 1zlk_A, 6ide_A, 4wuh_B
Binding Motifs: 5w43_AB taGGAannmTCTtA
5w43_B taAGA
Binding Sites: 5w43_E
5w43_F
			
Publications: Filippova EV, Zemaitaitis B, Aung T, Wolfe AJ, Anderson WF. Structural Basis for DNA Recognition by the Two-Component Response Regulator RcsB. MBio : (2018). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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