DNA Binding Motif

						

			
Accessions: 5w43_B (3D-footprint 20231221)

			
Names: Transcriptional regulatory protein RcsB
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of the two-component response regulator RcsB-DNA complex
Length: 5
Consensus: taAGA
Weblogo: 
PSSM: P0      A      C      G      T
01     12     10     10     64      t
02     64     10     10     12      a
03     85     11      0      0      A
04      0      0     96      0      G
05     85     10      0      1      A
Binding TFs: 5w43_B (Response regulator receiver domain, Bacterial regulatory proteins, luxR family, Sigma-70, region 4)
Binding Sites: 5w43_E
5w43_F
			
Publications: Filippova EV, Zemaitaitis B, Aung T, Wolfe AJ, Anderson WF. Structural Basis for DNA Recognition by the Two-Component Response Regulator RcsB. MBio : (2018). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.