Transcription Factor

Accessions: 4xrm_B (3D-footprint 20231221)
Names: Homeobox protein Meis2, Meis1-related protein 1, MEIS2_HUMAN
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: O14770
Length: 64
Pfam Domains: 16-55 Homeobox KN domain
18-55 Homeobox domain
Sequence:
(in bold interface residues)
1 SMGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPM 60
61 IDQS
Interface Residues: 46, 47, 50, 51, 52, 54, 55
3D-footprint Homologues: 7q3o_C, 4j19_B, 1le8_A, 1au7_A, 3lnq_A, 1le8_B, 6fqq_E, 4xrs_G, 2lkx_A, 1fjl_B, 6a8r_A, 3rkq_B, 1mnm_C, 5flv_I, 3cmy_A, 1k61_B, 6es3_K, 1puf_B, 8g87_X, 5hod_A, 3l1p_A, 6fqp_B, 4xrm_B, 2d5v_B, 5zfz_A
Binding Motifs: 4xrm_AB TGACAATTGTCA
4xrm_B TTGTCA
Binding Sites: 4xrm_L
4xrm_M
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Related annotations: PaperBLAST

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