Transcription Factor
| Accessions: | I1KFN0 (JASPAR 2024) |
| Names: | I1KFN0_SOYBN |
| Organisms: | Glycine max |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | I1KFN0 |
| Length: | 316 |
| Pfam Domains: | 243-291 Basic region leucine zipper 246-297 bZIP transcription factor |
| Sequence: (in bold interface residues) | 1 MGSQCGGDNSGKHSQLQPLVPQNSMYSLTLDEVQNHLGDLGKPLSSMNLDELLKNVWTVE 60 61 ANQSTGVDIEGTALTSQAALQRQASLSLTSALSGKTVDEVWRDIQQSKDNKDKKSQERQS 120 121 TLGEMTLEDFLVKAGIVAEASNRKNTGATVGVDSNVVAPQFPQHGPWIQYAQPQYQHPQQ 180 181 GLMGIYIPGQNKAQPLHMGAGVATDVLYADGQVALSSPVMGTLSDTRRPGRKRGTSEDMV 240 241 EKTVERRQKRMIKNRESAARSRARKQAYTTELEHKVSRLEEENEKLRRQQELEKMLSSNP 300 301 PPEPRYQIRRTSSASF |
| Interface Residues: | 250, 254, 257, 258, 261, 262 |
| 3D-footprint Homologues: | 7x5e_E, 7x5e_F, 2wt7_A, 5t01_B, 1dh3_C |
| Binding Motifs: | MA1808.1 caCGTGGCAww MA1808.2 aCGTGGCA |
| Binding Sites: | MA1808.2.11 MA1808.2.15 MA1808.2.10 / MA1808.2.14 / MA1808.2.5 / MA1808.2.8 MA1808.2.17 MA1808.2.1 MA1808.2.16 / MA1808.2.4 MA1808.1.14 / MA1808.1.6 MA1808.1.1 / MA1808.1.3 MA1808.1.10 MA1808.1.11 MA1808.1.12 MA1808.1.13 MA1808.1.14 MA1808.1.15 MA1808.1.16 MA1808.1.17 MA1808.1.18 MA1808.1.19 MA1808.1.2 MA1808.1.20 MA1808.1.3 / MA1808.1.9 MA1808.1.12 / MA1808.1.4 MA1808.1.13 / MA1808.1.5 MA1808.1.15 / MA1808.1.7 MA1808.1.16 / MA1808.1.8 MA1808.1.18 / MA1808.1.9 MA1808.2.12 / MA1808.2.18 MA1808.2.3 MA1808.2.6 MA1808.1.1 MA1808.1.10 MA1808.1.11 MA1808.1.17 MA1808.1.19 MA1808.1.2 MA1808.1.20 MA1808.1.4 MA1808.1.5 MA1808.1.6 MA1808.1.7 MA1808.1.8 MA1808.2.13 MA1808.2.19 MA1808.2.2 MA1808.2.20 / MA1808.2.7 MA1808.2.9 |
| Publications: | Liao Y, Zou HF, Wei W, Hao YJ, Tian AG, Huang J, Liu YF, Zhang JS, Chen SY. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Planta 228:225-40 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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