DNA Binding Motif
| Accessions: | MA1808.1 (JASPAR 2024) |
| Names: | GLYMA-06G314400 |
| Organisms: | Glycine max |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | caCGTGGCAww |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 4908 11920 5299 5706 c 02 18522 2293 3696 3322 a 03 1272 24345 1277 939 C 04 745 411 25777 900 G 05 433 530 207 26663 T 06 595 357 26215 666 G 07 1246 1261 21101 4225 G 08 1863 24505 862 603 C 09 22437 1356 2120 1920 A 10 7096 6788 6336 7613 w 11 7296 6274 6535 7728 w |
| Type: | Heterodimer |
| Binding TFs: | I1KFN0 (bZIP transcription factor, Basic region leucine zipper) I1KFN0 |
| Binding Sites: | MA1808.1.14 / MA1808.1.6 MA1808.1.1 / MA1808.1.3 MA1808.1.10 MA1808.1.11 MA1808.1.12 MA1808.1.13 MA1808.1.14 MA1808.1.15 MA1808.1.16 MA1808.1.17 MA1808.1.18 MA1808.1.19 MA1808.1.2 MA1808.1.20 MA1808.1.3 / MA1808.1.9 MA1808.1.12 / MA1808.1.4 MA1808.1.13 / MA1808.1.5 MA1808.1.15 / MA1808.1.7 MA1808.1.16 / MA1808.1.8 MA1808.1.18 / MA1808.1.9 MA1808.1.1 MA1808.1.10 MA1808.1.11 MA1808.1.17 MA1808.1.19 MA1808.1.2 MA1808.1.20 MA1808.1.4 MA1808.1.5 MA1808.1.6 MA1808.1.7 MA1808.1.8 |
| Publications: | Liao Y, Zou HF, Wei W, Hao YJ, Tian AG, Huang J, Liu YF, Zhang JS, Chen SY. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Planta 228:225-40 (2008). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.