DNA Binding Site

Accessions: 4egy_T (3D-footprint 20231221)
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 20
Sequence: AATATTTGTACGAACAATTT
Binding TFs: 4egy_B (Bacterial regulatory proteins, gntR family, DeoR-like helix-turn-helix domain, HTH domain)
Binding Motifs: 4egy_AB TGyACGAaCA
4egy_B TCgnaCA
Publications: Jain D, Nair D.T. Spacing between core recognition motifs determines relative orientation of AraR monomers on bipartite operators. Nucleic acids research 41:639-47 (2013). [Pubmed]

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