DNA Binding Site

						

			
Accessions: TAAATTAA (UniPROBE 20160601), MA2158.1.1 (JASPAR 2024), MA2158.1.11 (JASPAR 2024)

			
Organisms: Saccharomyces cerevisiae, Caenorhabditis elegans
Libraries: UniPROBE 20160601 1, JASPAR 2024 2
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 8
Sequence: TAAATTAA
Type: Heterodimer
Binding TFs: UP00274A (Homeobox domain)
UP00294A (SRF-type transcription factor (DNA-binding and dimerisation domain))
P20271
Binding Motifs: UP00274A_1 ttsmmaYTAATTARwwwmks
UP00294A_1 tkacctwtAATTawaybwsmw
MA2158.1 tTAATTAa
			
Publications: *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed]


Kagoshima H, Kohara Y. Co-expression of the transcription factors CEH-14 and TTX-1 regulates AFD neuron-specific genes gcy-8 and gcy-18 in C. elegans 399:325-36 (Dev). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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