DNA Binding Site

Accessions: xylA_1 (DBTBS 1.0)
Names: xylA_1
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 30
Sequence: aactatttTGGAAGCGCAAACAaagtggtt
Binding TFs: CcpA (Bacterial regulatory proteins, lacI family, Periplasmic binding proteins and sugar binding domain of LacI family, Periplasmic binding protein-like domain, Periplasmic binding protein domain)
Binding Motifs: CcpA TGwAARCGbTwtC
Publications: Kim J.H, Yang Y.K, Chambliss G.H. Evidence that Bacillus catabolite control protein CcpA interacts with RNA polymerase to inhibit transcription. Molecular microbiology 56:155-62 (2005). [Pubmed]

Chauvaux S, Paulsen I.T, Saier M.H. CcpB, a novel transcription factor implicated in catabolite repression in Bacillus subtilis. Journal of bacteriology 180:491-7 (1998). [Pubmed]

Gärtner D, Geissendörfer M, Hillen W. Expression of the Bacillus subtilis xyl operon is repressed at the level of transcription and is induced by xylose. Journal of bacteriology 170:3102-9 (1988). [Pubmed]

Jacob S, Allmansberger R, Gärtner D, Hillen W. Catabolite repression of the operon for xylose utilization from Bacillus subtilis W23 is mediated at the level of transcription and depends on a cis site in the xylA reading frame. Molecular & general genetics : MGG 229:189-96 (1991). [Pubmed]

Kraus A, Hueck C, Gärtner D, Hillen W. Catabolite repression of the Bacillus subtilis xyl operon involves a cis element functional in the context of an unrelated sequence, and glucose exerts additional xylR-dependent repression. Journal of bacteriology 176:1738-45 (1994). [Pubmed]

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