DNA Binding Site

Accessions: 1je8_C (3D-footprint 20231221), 1je8_D (3D-footprint 20231221), 1je8_G (3D-footprint 20231221), 1je8_H (3D-footprint 20231221)
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 20
Sequence: CGTACCCATTAATGGGTACG
Binding TFs: 1je8_B / 1je8_F (Bacterial regulatory proteins, luxR family, Sigma-70, region 4, Sigma-70, region 4, Winged helix-turn-helix DNA-binding)
Binding Motifs: 1je8_AB TACCnAnnnaTGGGTA
1je8_EF TaCCnAnnnnTnGGtA
1je8_F TnGGtA
Publications: Maris AE., Sawaya MR., Kaczor-Grzeskowiak M., Jarvis MR., Bearson SM., Kopka ML., Schroder I., Gunsalus RP., Dickerson RE. Dimerization allows DNA target site recognition by the NarL response regulator. Nat Struct Biol. 9(10):771-8 (2002). [Pubmed]

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