DNA Binding Motif
| Accessions: | 1je8_F (3D-footprint 20231221) |
| Names: | Nitrate/Nitrite Response Regulator Protein NARL |
| Organisms: | Escherichia coli, strain K12 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a High Affinity Site |
| Length: | 6 |
| Consensus: | TnGGtA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 20 76 T 02 24 24 24 24 n 03 0 0 96 0 G 04 0 0 96 0 G 05 19 19 20 38 t 06 96 0 0 0 A |
| Binding TFs: | 1je8_F (Bacterial regulatory proteins, luxR family, Sigma-70, region 4, Sigma-70, region 4, Winged helix-turn-helix DNA-binding) |
| Binding Sites: | 1je8_G / 1je8_H |
| Publications: | Maris AE., Sawaya MR., Kaczor-Grzeskowiak M., Jarvis MR., Bearson SM., Kopka ML., Schroder I., Gunsalus RP., Dickerson RE. Dimerization allows DNA target site recognition by the NarL response regulator. Nat Struct Biol. 9(10):771-8 (2002). [Pubmed] |
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