DNA Binding Motif

						

			
Accessions: 3mfk_AB (3D-footprint 20231221)

			
Names: Protein C-ets-1
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Ets1 complex with stromelysin-1 promoter DNA
Length: 13
Consensus: AGGAagnnnnTCC
Weblogo: 
PSSM: P0      A      C      G      T
01     69      8      8     11      A
02      0      0     96      0      G
03      0      0     96      0      G
04     96      0      0      0      A
05     52     19     17      8      a
06      8     17     61     10      g
07     24     24     24     24      n
08     24     24     24     24      n
09     24     24     24     24      n
10     24     24     24     24      n
11      0      0      0     96      T
12      0     96      0      0      C
13      0     96      0      0      C
Type: Heterodimer
Binding TFs: 3mfk_A (Ets-domain)
3mfk_B (Ets-domain)
Binding Sites: 3mfk_C
3mfk_D
			
Publications: Babayeva N.D, Wilder P.J, Shiina M, Mino K, Desler M, Ogata K, Rizzino A, Tahirov T.H. Structural basis of Ets1 cooperative binding to palindromic sequences on stromelysin-1 promoter DNA. Cell cycle (Georgetown, Tex.) 9:3054-62 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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