DNA Binding Motif
| Accessions: | 2r1j_L (3D-footprint 20231221) |
| Names: | Repressor protein C2 |
| Organisms: | Enterobacteria phage P22 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Crystal Structure of the P22 c2 Repressor protein in complex with the synthetic operator 9T |
| Length: | 5 |
| Consensus: | TTAAG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 9 9 9 69 T 02 9 9 9 69 T 03 96 0 0 0 A 04 96 0 0 0 A 05 9 9 69 9 G |
| Binding TFs: | 2r1j_L (Helix-turn-helix, Helix-turn-helix domain, Cro/C1-type HTH DNA-binding domain, Helix-turn-helix domain) |
| Binding Sites: | 2r1j_A 2r1j_B |
| Publications: | Watkins D, Hsiao C, Woods K.K, Koudelka G.B, Williams L.D. P22 c2 repressor-operator complex: mechanisms of direct and indirect readout. Biochemistry 47:2325-38 (2008). [Pubmed] |
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