DNA Binding Motif
| Accessions: | GCM1_PITX1_1 (HumanTF2 1.0) |
| Names: | GCM1_PITX1 |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF2 1.0 1 1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
| Notes: | Site type: heterodimeric; Experiment type: CAP-SELEX |
| Length: | 21 |
| Consensus: | GGaTTAsssgggkkrTGCGGG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 9 101 20 G 02 0 13 101 16 G 03 101 38 22 9 a 04 15 0 0 101 T 05 22 6 14 101 T 06 101 0 5 2 A 07 24 26 47 4 s 08 12 32 51 6 s 09 23 27 32 19 s 10 17 18 43 23 g 11 16 21 49 15 g 12 18 3 59 21 g 13 18 23 26 34 k 14 13 18 32 38 k 15 48 23 33 0 r 16 3 0 0 101 T 17 0 1 101 0 G 18 0 101 32 9 C 19 9 9 101 11 G 20 7 1 101 2 G 21 2 2 101 2 G |
| Type: | Heterodimer |
| Binding TFs: | GCM1_TF1 (GCM motif protein) PITX1_TF1 / PITX1_TF2 (Homeobox domain) |
| Publications: | Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.