DNA Binding Motif

						

			
Accessions: ELK1_FOXI1_2_3_4_5_6 (HumanTF2 1.0)

			
Names: ELK1_FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 15
Consensus: ammGGAAbrtAAACA
Weblogo: 
PSSM: P0      A      C      G      T
01    152     73     90     59      a
02    136    177     66     61      m
03    141    243     41     16      m
04     27     16    243     16      G
05     45     15    243     25      G
06    243      6     33     28      A
07    243     11     19     66      A
08     42     76     63     62      b
09     97     32    146      5      r
10     79     25     11    243      t
11    220     23      1      1      A
12    243      0      4      7      A
13    243     24     27      0      A
14     13    181      0     61      C
15    243     15     12      6      A
Type: Heterodimer
Binding TFs: ELK1_TF2 (Ets-domain)
ELK1_Full (Ets-domain)
FOXI1_TF2 (Fork head domain)
ELK1_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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