DNA Binding Motif

						

			
Accessions: 4iwr_F (3D-footprint 20231221)

			
Names: Regulatory protein
Organisms: Enterobacter sp. RFL1396
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: C.Esp1396I bound to a 25 base pair operator site
Length: 5
Consensus: gTCcG
Weblogo: 
PSSM: P0      A      C      G      T
01     12     12     60     12      g
02      0     12      0     84      T
03      0     96      0      0      C
04     12     60     12     12      c
05      0      0     96      0      G
Binding TFs: 4iwr_F (Helix-turn-helix, Helix-turn-helix domain)
Binding Sites: 4iwr_G
4iwr_H
			
Publications: Martin RN, McGeehan JE, Ball NJ, Streeter SD, Thresh SJ, Kneale GG. Structural analysis of DNA-protein complexes regulating the restriction-modification system Esp1396I. Acta Crystallogr Sect F Struct Biol Cryst Commun : (2013). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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