DNA Binding Motif

						

			
Accessions: 5fur_ACGI (3D-footprint 20231221)

			
Names: TATA-BOX-BINDING PROTEIN
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of human TFIID-IIA bound to core promoter DNA
Length: 8
Consensus: CTTTTATA
Weblogo: 
PSSM: P0      A      C      G      T
01      9     75      6      6      C
02      0      0      0     96      T
03      6      9      6     75      T
04      6      9      6     75      T
05      6      0      1     89      T
06     75      9      6      6      A
07      0      0      0     96      T
08     96      0      0      0      A
Binding TFs: 5fur_A (Transcription factor TFIID (or TATA-binding protein, TBP))
Binding Sites: 5fur_E
5fur_F
			
Publications: Louder RK, He Y, López-Blanco JR, Fang J, Chacón P, Nogales E. Structure of promoter-bound TFIID and model of human pre-initiation complex assembly. Nature 531:604-9 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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