DNA Binding Motif
| Accessions: | GCM1_HOXA2 (HumanTF2 1.0) |
| Names: | GCM1_HOXA2 |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF2 1.0 1 1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
| Notes: | Site type: heterodimeric; Experiment type: CAP-SELEX |
| Length: | 15 |
| Consensus: | rTrsGGGygTrATkr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 477 61 295 31 r 02 0 0 10 772 T 03 258 32 514 5 r 04 119 477 296 171 s 05 95 19 772 48 G 06 4 4 772 10 G 07 15 17 772 8 G 08 54 414 69 236 y 09 114 172 330 156 g 10 156 72 115 772 T 11 772 0 320 61 r 12 772 0 31 0 A 13 27 81 222 772 T 14 37 255 365 408 k 15 433 156 340 112 r |
| Type: | Heterodimer |
| Binding TFs: | GCM1_TF1 (GCM motif protein) HOXA2_TF2 (Homeobox domain) |
| Publications: | Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
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