DNA Binding Motif

						

			
Accessions: ELK1_TBX21_2_3 (HumanTF2 1.0)

			
Names: ELK1_TBX21
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 29
Consensus: agGTGykAaawwwwwtTmaCACMGGAart
Weblogo: 
PSSM: P0      A      C      G      T
01   2038    259    407    390      a
02    483    276    828    452      g
03     99    325   2038    164      G
04     36    343     30   2038      T
05    106      5   2038     42      G
06    307    534    166   1031      y
07    180    273    970    614      k
08   2038     74    307    121      A
09    941    302    332    462      a
10    630    467    440    500      a
11    657    309    326    745      w
12    701    354    303    680      w
13    690    390    245    713      w
14    728    300    364    645      w
15    608    362    379    689      w
16    498    266    360    913      t
17    155    341     65   1477      T
18    774    623    327    314      m
19   1033    115    469    420      a
20    111   2038     10     47      C
21   1567      4    440     27      A
22    155   1592    240     51      C
23    562   1475     63     12      M
24     72     26   2038     38      G
25     28     33   2038     29      G
26   2038     45     76    175      A
27   1491    148    114    547      a
28    588    382    778    289      r
29    415    503    292    828      t
Type: Heterodimer
Binding TFs: ELK1_TF2 (Ets-domain)
ELK1_Full (Ets-domain)
TBX21_TF2 (T-box)
ELK1_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.