DNA Binding Motif
| Accessions: | 6jgw_B (3D-footprint 20231221) |
| Names: | CadR |
| Organisms: | Pseudomonas putida |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Crystal structure of the transcriptional regulator CadR from P. putida in complex with DNA |
| Length: | 9 |
| Consensus: | CnnTnTnGT |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 7 73 9 7 C 02 24 24 24 24 n 03 24 24 24 24 n 04 7 9 7 73 T 05 24 24 24 24 n 06 9 7 7 73 T 07 24 24 24 24 n 08 0 0 96 0 G 09 9 7 7 73 T |
| Binding TFs: | 6jgw_B (MerR family regulatory protein, MerR, DNA binding, MerR HTH family regulatory protein) |
| Binding Sites: | 6jgw_C 6jgw_D |
| Publications: | Liu X, Hu Q, Yang J, Huang S, Wei T, Chen W, He Y, Wang D, Liu Z, Wang K, Gan J, Chen H. Selective cadmium regulation mediated by a cooperative binding mechanism in CadR. Proc Natl Acad Sci U S A 116:20398-20403 (2019). [Pubmed] |
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