Transcription Factor
Accessions: | 6jgw_B (3D-footprint 20231221) |
Names: | CadR, Cd(II, Q93TP7_PSEPU |
Organisms: | Pseudomonas putida |
Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
Uniprot: | Q93TP7 |
Length: | 116 |
Pfam Domains: | 1-68 MerR HTH family regulatory protein 2-39 MerR family regulatory protein 44-107 MerR, DNA binding |
Sequence: (in bold interface residues) | 1 MKIGELAKATDCAVETIRYYEREQLLPEPARSDGNYRLYTQAHVERLTFIRNCRTLDMTL 60 61 DEIRSLLRLRDSPDDSGSVNALIDEHIEHVQARIDGLVALQEQLVELRRRCNAQGA |
Interface Residues: | 15, 18, 19, 22, 23, 36, 37 |
3D-footprint Homologues: | 7tea_B, 5c8e_C, 6xh7_H, 2zhg_A, 7tec_A, 1r8d_B, 6xl5_H, 4r24_B, 6jgx_B, 1r8e_A, 7ckq_G, 4r4e_B, 6ldi_G, 2vz4_A, 5d8c_A |
Binding Motifs: | 6jgw_AB CnnTnTnGTnGCTnnAnnG 6jgw_B CnnTnTnGT |
Binding Sites: | 6jgw_C 6jgw_D |
Publications: | Liu X, Hu Q, Yang J, Huang S, Wei T, Chen W, He Y, Wang D, Liu Z, Wang K, Gan J, Chen H. Selective cadmium regulation mediated by a cooperative binding mechanism in CadR. Proc Natl Acad Sci U S A 116:20398-20403 (2019). [Pubmed] |
Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.