DNA Binding Motif

						

			
Accessions: 1cjg_AB (3D-footprint 20231221)

			
Names: PROTEIN (LAC REPRESSOR)
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: NMR STRUCTURE OF LAC REPRESSOR HP62-DNA COMPLEX
Length: 10
Consensus: TgAGCGCTCA
Weblogo: 
PSSM: P0      A      C      G      T
01      4      4      4     84      T
02      8     12     64     12      g
03     84      4      4      4      A
04      0      0     96      0      G
05      0     96      0      0      C
06      0      0     96      0      G
07      0     96      0      0      C
08      4      4      4     84      T
09      8     76      4      8      C
10     84      4      4      4      A
Binding TFs: 1cjg_A / 1cjg_B (Bacterial regulatory proteins, lacI family)
Binding Sites: 1cjg_C / 1cjg_D
			
Publications: Spronk C.A, Bonvin A.M, Radha P.K, Melacini G, Boelens R, Kaptein R. The solution structure of Lac repressor headpiece 62 complexed to a symmetrical lac operator. Structure (London, England : 1993) 7:1483-92 (1999). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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