DNA Binding Motif
| Accessions: | 1zq3_P (3D-footprint 20231221) |
| Names: | Homeotic bicoid protein |
| Organisms: | Drosophila melanogaster |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | NMR Solution Structure of the Bicoid Homeodomain Bound to the Consensus DNA Binding Site TAATCC |
| Length: | 8 |
| Consensus: | gGGAtTAG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 13 13 54 16 g 02 0 0 96 0 G 03 0 0 96 0 G 04 96 0 0 0 A 05 13 16 13 54 t 06 0 0 0 96 T 07 96 0 0 0 A 08 0 0 96 0 G |
| Binding TFs: | 1zq3_P (Homeobox domain, Homeodomain leucine-zipper encoding, Homez) |
| Binding Sites: | 1zq3_A 1zq3_B |
| Publications: | Baird-Titus J.M, Clark-Baldwin K, Dave V, Caperelli C.A, Ma J, Rance M. The solution structure of the native K50 Bicoid homeodomain bound to the consensus TAATCC DNA-binding site. Journal of molecular biology 356:1137-51 (2006). [Pubmed] |
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