DNA Binding Motif
| Accessions: | 1nwq_AC (3D-footprint 20231221) |
| Names: | CCAAT/enhancer binding protein alpha |
| Organisms: | Rattus norvegicus |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | CRYSTAL STRUCTURE OF C/EBPALPHA-DNA COMPLEX |
| Length: | 8 |
| Consensus: | TTGCGCAA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 96 T 02 0 0 0 96 T 03 0 0 96 0 G 04 0 96 0 0 C 05 0 11 76 9 G 06 9 67 11 9 C 07 86 9 1 0 A 08 67 9 9 11 A |
| Binding TFs: | 1nwq_A / 1nwq_C (bZIP transcription factor, Basic region leucine zipper) |
| Binding Sites: | 1nwq_B 1nwq_D |
| Publications: | Miller M, Shuman J.D, Sebastian T, Dauter Z, Johnson P.F. Structural basis for DNA recognition by the basic region leucine zipper transcription factor CCAAT/enhancer-binding protein alpha. The Journal of biological chemistry 278:15178-84 (2003). [Pubmed] |
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