DNA Binding Motif

						

			
Accessions: ETV5_CEBPD (HumanTF2 1.0), UN0523.1 (JASPAR 2024)

			
Names: ETV5_CEBPD, ETV5::CEBPD
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1, JASPAR 2024 2
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX, HT-SELEX
Length: 17
Consensus: rsCGGAwrTTGCGyAAy
Weblogo: 
PSSM: P0      A      C      G      T
01    113     29    119     42      r
02     39    164    138     15      s
03     50    302     64     11      C
04      4      9    302      1      G
05     11      6    302      0      G
06    302     25     21     22      A
07    130     23     10    139      w
08    112     26    162      1      r
09      0      6      0    302      T
10      0      2     38    302      T
11     62      0    239     15      G
12      6    302      8     29      C
13     50      7    302     10      G
14     19    198     17    104      y
15    302     26      0      7      A
16    302      7     18     13      A
17      7    116     60    119      y
Type: Heterodimer
Binding TFs: CEBPD_TF2 (bZIP transcription factor, Basic region leucine zipper)
ETV5_TF1 (Ets-domain)
P49716 (bZIP transcription factor, Basic region leucine zipper)
P49716
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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