DNA Binding Motif

						

			
Accessions: POU2F1_SOX15_1 (HumanTF2 1.0)

			
Names: POU2F1_SOX15
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: wtGmATaACAAwr
Weblogo: 
PSSM: P0      A      C      G      T
01    886    228    208    944      w
02    357    332    282   1830      t
03    173     24   1830     22      G
04    942    887     37     89      m
05   1830     87     38    108      A
06      0      0      5   1830      T
07   1830    239    581    214      a
08   1830     10      4    284      A
09     38   1830    282    353      C
10   1830     29      0     32      A
11   1830      5      4     26      A
12   1053    149     75   1830      w
13   1154    229    676    129      r
Type: Heterodimer
Binding TFs: POU2F1_TF1 (Homeobox domain, Pou domain - N-terminal to homeobox domain)
SOX15_TF2 (HMG (high mobility group) box, Domain of unknown function (DUF1898))
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.