DNA Binding Motif

						

			
Accessions: E2F3_FOXI1 (HumanTF2 1.0)

			
Names: E2F3_FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 15
Consensus: tGACACCGCGCCCaC
Weblogo: 
PSSM: P0      A      C      G      T
01    400    411    400   1040      t
02    449    155   1563     82      G
03   1953    297    133    101      A
04    155   2250     80    217      C
05   2250    121      6     55      A
06     45   2250     57     13      C
07     53   2250    186    124      C
08    101    154   2250     68      G
09     17   2250      0     51      C
10    209    233   2250     83      G
11     39   2250     49     54      C
12     88   2250      0     92      C
13    608   2250     32     75      C
14   1615    635    126    296      a
15    355   1558    184    154      C
Type: Heterodimer
Binding TFs: FOXI1_TF2 (Fork head domain)
E2F3_TF1 (E2F/DP family winged-helix DNA-binding domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.