DNA Binding Motif
| Accessions: | UP00021A_1 (UniPROBE 20160601) |
| Names: | MGC70044, MGC7737, Zfp281, Zinc finger protein 281 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 15 |
| Consensus: | tcmCCmyCCCCCmyc |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.20 0.17 0.20 0.43 t 02 0.14 0.44 0.18 0.24 c 03 0.26 0.56 0.07 0.11 m 04 0.14 0.74 0.05 0.07 C 05 0.04 0.88 0.05 0.03 C 06 0.25 0.59 0.02 0.14 m 07 0.12 0.59 0.03 0.25 y 08 0.02 0.94 0.01 0.03 C 09 0.04 0.95 0 0.01 C 10 0.02 0.95 0.01 0.02 C 11 0.02 0.96 0.01 0.01 C 12 0.03 0.94 0.01 0.02 C 13 0.30 0.52 0.03 0.15 m 14 0.16 0.51 0.05 0.28 y 15 0.16 0.65 0.13 0.06 c |
| Binding TFs: | UP00021A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Binding Sites: | AACCCCCA AACCCCCC AAGGGGGG ACCCCCAC ACCCCCCA AGGGGGGG ATGGGGGG CACCCCCA CACCCCCC CCACCCCC CCCCCACC CCCCCCAA CCCCCCAC CCCCCCCA CCCCCCCC CCCCCCTC CCTCCCCC CTCCCCCC GGGGGGGA GGGGGGTA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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