DNA Binding Site
| Accessions: | CCCCCCAC (UniPROBE 20160601) |
| Organisms: | Mus musculus, Drosophila melanogaster |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CCCCCCAC |
| Type: | Heterodimer |
| Binding TFs: | UP00021A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00022A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00024A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00537A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00539A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00540A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Binding Motifs: | UP00021A_1 tcmCCmyCCCCCmyc UP00022A_1 ycyccCCCCCCmmwys UP00024A_1 ywwsGACCCCCCayrd UP00021A_2 akkwkaCCCCCAwtwwr UP00022A_2 rrrtwCCCCCCggrrry UP00024A_2 wwTAttAwtAAAga UP00537A_1 raagccmCCskGGGGGGcyrays UP00537A_2 kymwtvyAGGgGGTmswkdtga UP00539A_1 / UP00539A_2 kyrshvrGACCACCCakrdygy UP00539A_3 rytmyyagCCyCCCACgtyrksk UP00539A_4 / UP00539A_5 ktmsdwrGACCACCCAgrwdgb UP00539A_6 wrykascgkGGGTGGCrrssray UP00540A_1 / UP00540A_2 sykksvrGACCACCCAcrwysmt UP00540A_3 kmTTvvCryGGwGGTCywrmyt UP00540A_4 / UP00540A_5 hasrgkgGACCACCCrgvdrgw UP00540A_6 rytcmhygCCaCmCacgckhgy |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.