DNA Binding Motif

						

			
Accessions: ERF_HES7_1 (HumanTF2 1.0)

			
Names: ERF_HES7
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 21
Consensus: rCCGGAAgygcGrCACGyGsc
Weblogo: 
PSSM: P0      A      C      G      T
01     97     41     58     20      r
02     41    217     36     13      C
03     47    217      3      0      C
04      0      2    217      2      G
05      0      0    217      5      G
06    217      1      2      6      A
07    217      5      9     59      A
08     52     28    129      7      g
09     21     56     26    114      y
10     51     35     84     47      g
11     46     84     42     45      c
12      5     33    173      5      G
13     85     16     90     25      r
14      4    217      1      4      C
15    217     15     44     19      A
16      7    217     15      0      C
17     23      7    217     45      G
18      5     79     13    137      y
19     12     18    217     23      G
20     18     85     66     47      s
21     44    114     28     32      c
Type: Heterodimer
Binding TFs: HES7_TF2 (Helix-loop-helix DNA-binding domain)
ERF_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.